Species	Tissue	CellType	Marker	Resource
Mouse	Bladder organ	Activated B cell	Cd79a, Ctla4, Ms4a1, Mzb1	32366865
Mouse	Bladder organ	Alternatively activated macrophage	Cd163, Csf1r, Cxcl2, F13a1, Folr2, Mrc1, Ms4a6b, Ms4a6c, Ms4a6d, Tgfbi	32460812
Mouse	Bladder organ	B cell	Cd79a, Blnk, Cd19, Cd79b, Ms4a1, Mzb1	32366865, 31462402, 32460812
Mouse	Bladder organ	Basal cell	Krt5, Ccna2, Ccnb1, Hmmr, Itgb4, Krt13, Krt14, Krt17, Mcm2, Mcm3, Mcm4, Mcm7, Plk1, Shh, Trp63, Upk1a, Upk1b, Upk2, Upk3a, Upk3b, Upk3bl	30283141, 29474909, 31462402, 33538002
Mouse	Bladder organ	Cancer-associated fibroblast	Ccn2, Col14a1, Col1a1, Cxcl1, Cxcl12, Cxcl14, Cxcl2, Cxcl3, Cxcl5, Fap, Itga8, Mmp2, Mmp3, Mmp9, Pdgfd, Pdgfra, Pdgfrl, Pdpn, Sfrp1, Sfrp2, Sfrp4, Tgfb3, Thy1, Twist2, Wnt2, Wnt5a	32460812
Mouse	Bladder organ	Cancer-associated myofibroblast	Acta2, Actg2, Myh10, Myh9, Myl12a, Myl6, Myl6b, Myl9, Mylk, Tagln	32460812
Mouse	Bladder organ	CD4-positive, alpha-beta T cell	Cd3d, Cd3e, Cd3g, Cd4	32366865
Mouse	Bladder organ	CD8-positive, alpha-beta cytotoxic T cell	Gzma, Gzmb, Ifng, Nkg7	32460812
Mouse	Bladder organ	CD8-positive, alpha-beta T cell	Cd3d, Cd3e, Cd3g, Cd8b1, Gzmk	32366865
Mouse	Bladder organ	Dendritic cell	Cd209a, Mgl2, Sirpa	32366865, 29474909, 31462402
Mouse	Bladder organ	Endodermal cell	Cxcr4, Foxa2, Kit	31273737
Mouse	Bladder organ	Endothelial cell	Pecam1, Cdh5, Sele, Vcam1	30283141, 29474909, 31462402, 31288631, 25689100
Mouse	Bladder organ	Epithelial cell	Epcam, Krt19, Cdh1, Krt18, Krt8	30283141, 29474909, 31462402, 32460812
Mouse	Bladder organ	Exhausted T cell	Btla, Cblb, Ctla4, Havcr2, Icos, Lag3, Pdcd1, Prdm1	32460812
Mouse	Bladder organ	Fibroblast	Col1a2, Col3a1, Dcn, Col1a1, Col6a1, Ddr2, Fap, Pdgfra, Pdpn, S100a4, Timp2	31462402, 32460812, 31288631
Mouse	Bladder organ	Gamma-delta T cell	Tcrd, Tcrg	32366865
Mouse	Bladder organ	Inflammatory macrophage	Ccl2, Ccl3, Ccl4, Ccr7, Cd14, Cd80, Cxcl10, Cxcl9, Egr1, Ier3, Irf5, Nfe2l2, Nfkbid, Nfkbiz, Nlrp3, Nos2, Nr4a1, Phlda1, Tlr2, Tnf, Zfp36	32460812
Mouse	Bladder organ	Intermediate cell	Upk1a, Upk1b, Upk3b, Upk2, Upk3a, Upk3bl, Krt13, Krt20, Krt5	31462402, 33538002
Mouse	Bladder organ	Leydig cell	Vim	31462402
Mouse	Bladder organ	Macrophage	Adgre1, Cd14, Cd163, Cd68, Cd86, Csf1r, Fcgr4, Lyz1, Lyz2, Ms4a7	32366865, 29474909, 32460812
Mouse	Bladder organ	Mesenchymal cell	Car3, Dcn, Scara5	30283141, 29474909
Mouse	Bladder organ	Migratory dendritic cell	Cacnb3, Flt3, Fscn1, Nudt17	32366865
Mouse	Bladder organ	Monocyte	Cd14, Ly6c2, Lyz1, Ms4a7	32366865, 31462402
Mouse	Bladder organ	Myofibroblast cell	Acta2	31462402
Mouse	Bladder organ	Naive B cell	Cd79a, Ighd, Ms4a1	32366865
Mouse	Bladder organ	Natural killer cell	Ncr1, Xcl1, Cd9, Fcer1g, Gzma, Gzmb	32366865, 29474909, 32460812
Mouse	Bladder organ	Neuron	Gpm6a	31462402
Mouse	Bladder organ	Pericyte	Cox4i2, Mef2c, Pcp4l1	35722109
Mouse	Bladder organ	Peritoneal macrophage	Adgre1	32366865
Mouse	Bladder organ	Plasma cell	Jchain	32366865
Mouse	Bladder organ	Plasmacytoid dendritic cell	Cox6a2, Flt3, Irf8, Pacsin1, Siglech	32366865
Mouse	Bladder organ	Regulatory T cell	Foxp3, Il2ra	32460812
Mouse	Bladder organ	Smooth muscle cell	Cnn1, Tagln, Actg2, Car3, Col1a1, Col1a2, Col3a1, Col6a2, Dcn, Des, Fbln5, Ly6a, Tgfbi, Thbs2, Tpm2	29474909, 31462402, 31288631, 34411694
Mouse	Bladder organ	Stem cell	Pou5f1	30412716
Mouse	Bladder organ	Superficial cell	Upk1a, Upk1b, Upk3a, Upk3b, Cdh1, Grhl3, Ivl, Jun, Klf6, Krt20, Mapk8, Mapk8ip3, Mapk9, Psca, Rab11fip1, Tjp1, Upk2	30283141, 29474909, 31462402, 33538002
Mouse	Bladder organ	T cell	Cd2, Cd3d, Cd3e	31462402, 32460812
Mouse	Bladder organ	Type 1 conventional dendritic cell	Clec9a, Flt3, Xcr1	32366865
Mouse	Bladder organ	Type 2 conventional dendritic cell	Mgl2, Flt3, Sirpa	32366865
Mouse	Bladder organ	Urothelial cell	Upk1b, Upk2	29474909, 31273737